TSitologiya i Genetika 2015, vol. 49, no. 4, 3-10
Cytology and Genetics 2015, vol. 49, no. 4, 207–219, doi: https://www.doi.org/10.3103/S0095452715040088

Bioinformatics comparison of human and plant phosphatomes

Samofalova D.A., Кarpov P.A., Blume Ya.B.

SUMMARY. The study presents the results of bioinformatic comparison of protein phosphatases from higher plants and human phosphatom (150 sequences). Based on sequence and profile comparison with known catalytic domains, 204 plant homologues from Physcomitrella patens and Arabidopsis thaliana where selected. Clustering of joint group of plant and mammalian protein phosphatases revealed fundamental differences in plant and human phosphatomes. At the same time, it was shown significant differences in the set of protein phosphatases in P. patens, A. thaliana, and such monocots as Orysa sativa and Zea mays.

Keywords: protein phosphatases, human phosphatome, plant phosphatome, bioinformatics, phylogeny

TSitologiya i Genetika
2015, vol. 49, no. 4, 3-10

Current Issue
Cytology and Genetics
2015, vol. 49, no. 4, 207–219,
doi: 10.3103/S0095452715040088

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